LF219-15 Tools for Biochemical Discovery
Introductory description
This module is a core requirement for the Biochemistry degree stream and it is also a natural, though not obligatory, foundation for a more advanced module in Year 3, ‘Structural Molecular Biology’ which takes the subject further, particularly in terms of biophysical techniques and computer-based methods for studying protein structure and function. It will provide an appreciation of the principles upon which key techniques in the field of biochemical discovery provide biochemical information.
Module aims
Students will gain from this module the ability to discuss with confidence the theoretical and practical basis of key techniques in the field of biochemical discovery. They will understand the principles which underlie interpretation of data sets obtained with these techniques and be able to make informed decisions as to which technique is appropriate to use for a particular type of biochemical sample. They will gain an appreciation of how different techniques can collectively contribute to the understanding of a biological problem and will be aware of what is the current state-of-the-art for key techniques in biochemical discovery.
Outline syllabus
This is an indicative module outline only to give an indication of the sort of topics that may be covered. Actual sessions held may differ.
Introduction to Spectroscopic techniques
Lecture 1-3 Introduction to mass spectrometry and proteomics
Lecture 4- Solution spectroscopies - Circular dichroism
Lecture 5 - Solution spectroscopies - Fluorescence
Biophysical techniques to identify and measure biological interactions
Lecture 6-7 Introducing affinity and thermodynamics, examples of biological interactions where thismatters
Lecture 8-9 Protein-protein interactions; the interactome
Introduction to structural biology techniques
Lectures 10 - 12 Crystallography
Lectures 13-14 NMR
Lectures 15 and 16 - Principles of structure determination by cryo-electron microscopy
Learning outcomes
By the end of the module, students should be able to:
- Understand the theoretical and practical basis of key techniques in the field of biochemical discovery
- Understand the principles which underlie interpretation of data sets obtained with these techniques
- Understand research techniques and their applications
- Understand how different techniques can collectively contribute to the understanding of a biological problem
- Understand the current state-of-the-art for key techniques in biochemical discovery
Subject specific skills
Understand the theoretical and practical basis of key techniques in the field of biochemical discovery
Understand the principles which underlie interpretation of data sets obtained with these techniques
Make decisions as to which technique is appropriate to use for a particular type of biochemical sample
Appreciate how different techniques can collectively contribute to the understanding of a biological problem
Show awareness of what is the current state-of-the-art for key techniques in biochemical discovery
Transferable skills
Quantitative analysis, self directed learning, adult learning, appraisal of source material
Study time
Type | Required |
---|---|
Lectures | 16 sessions of 1 hour (11%) |
Practical classes | 3 sessions of 6 hours (12%) |
Private study | 41 hours (27%) |
Assessment | 75 hours (50%) |
Total | 150 hours |
Private study description
self directed learning and revision
Costs
No further costs have been identified for this module.
You do not need to pass all assessment components to pass the module.
Assessment group D2
Weighting | Study time | Eligible for self-certification | |
---|---|---|---|
Tools for Biochemistry Laboratory | 30% | 30 hours | Yes (extension) |
3x6 hr laboratory class- students submit a written report |
|||
Examination | 70% | 45 hours | No |
Section A: short answer questions. Section B: longer questions (may be essays, data-led or scenario-based). |
Assessment group R2
Weighting | Study time | Eligible for self-certification | |
---|---|---|---|
In-person Examination - Resit | 100% | No | |
Section A: short answer questions. Section B: longer questions (may be essays, data-led or scenario-based). |
Feedback on assessment
Informally via lecture workshops.
Courses
This module is Core for:
-
UBSA-C700 Undergraduate Biochemistry
- Year 2 of C700 Biochemistry
- Year 2 of C700 Biochemistry
- Year 2 of C700 Biochemistry
- Year 2 of C700 Biochemistry
-
ULFA-C1A2 Undergraduate Biochemistry (MBio)
- Year 2 of C1A2 Biochemistry
- Year 2 of C700 Biochemistry
- Year 2 of ULFA-C1A6 Undergraduate Biochemistry with Industrial Placement (MBio)